DNA

Part:BBa_K4833007:Experience

Designed by: Yueyang Liang   Group: iGEM23_JLU-NBBMS   (2023-10-08)


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Applications of BBa_K4833007

As shown in Figure 1,the shSTAT3/shPD-L1 composite part consists of four parts: the H1 promoter, shSTAT3 sequence, U6 promoter, and shPD-L1 sequence. The shSTAT3/shPD-L1 composite element is transcribed to generate shSTAT3 and shPD-L1, which silence the expression of STAT3 and PD-L1 genes in tumor cells through RNAi mechanism and inhibit tumor cell proliferation.

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Fig.1 shSTAT3/shPD-L1 composite part


We placed this composite part in a plasmid for biological functional testing .


1 Detect the expression levels of STAT3 and PD-L1 in CT26 cells by RT-PCR and Western Blot

We used Lipo3000 transfection reagent to transiently transfect shControl plasmid, shSTAT3 plasmid, shPD-L1 plasmid, and shSTAT3/shPD-L1 recombinant plasmid into mouse colon cancer CT26 cells. Cells were collected 24 hours after transfection for RT-PCR to detect gene expression levels and 48 hours after transfection for Western blot to detect protein expression levels. As shown in Figure 2, compared with the single silencing group, the shSTAT3/shPD-L1 recombinant plasmid transfection group showed a significant decrease in STAT3 and PD-L1 mRNA expression;compared with the single silencing group, the recombinant plasmid transfection group showed a significant decrease in STAT3 and PD-L1 protein expression (P<0.001). These results indicate that the shSTAT3/shPD-L1 recombinant plasmid was successfully transfected into CT26 cells and exerted its biological effects.


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Figure 2. Expression levels of STAT3 and PD-L1 in CT26 cells were determined by RT-PCR and Western Blot Quantification of mRNA expression of STAT3 and PD-L1 (B) Protein of STAT3 and PD-L1 Expression status (C) Quantification of protein expression of STAT3 and PD-L1(Data are mean±SEM)


Our designed shSTAT3/shPD-L1 composite part can significantly inhibit the transcription and translation of PD-L1 and STAT3 genes!


2 The effect of shSTAT3/shPD-L1 on the proliferation of colorectal cancer CT26 cells.

2.1 Assess the impact of shSTAT3/shPD-L1 on the proliferation of colon cancer CT26 cells by CCK-8 experiment.

CCK-8 assay was performed to analyze the effect of shSTAT3/shPD-L1 recombinant plasmids on the growth status of colon cancer cells. Transfected CT26 cells were seeded in a 96-well plate and cultured for 24, 48, and 72 hours. After incubating with CCK-8 solution for 1 hour, cell growth was assessed by measuring the absorbance. Figure 3 demonstrates that compared to the control group and single gene silencing group, shSTAT3/shPD-L1 recombinant plasmids significantly inhibited the growth of CT26 cells (P<0.001), with a statistically significant difference.

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Fig.3 Cell proliferation capacity detected by CCK-8 assay.(Data are presented as mean ± SEM).

Our designed shSTAT3/shPD-L1 composite part can significantly inhibit the proliferation of colon cancer cells!



2.2 Assess the effect of shSTAT3/shPD-L1 on the proliferation of CT26 colon cancer cells by the colony formation .

To investigate the effect of shSTAT3/shPD-L1 recombinant plasmids on the proliferation of colon cancer cells, a colony formation assay was conducted. As shown in Figure 4, after seeding CT26 cells, the number of colonies formed in the shSTAT3/shPD-L1 transfected group was significantly lower than the control group and the single gene silencing group (P<0.001), indicating a significant difference according to statistical analysis. These results suggest that shSTAT3/shPD-L1 recombinant plasmids can significantly inhibit the colony formation ability of CT26 colon cancer cells.

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Figure 4. Cell proliferation was measured in the clone formation assay(A)Results of clone formation experiment diagram (B) Quantification diagram of results of clone formation experiment(Data are mean±SEM)


Our designed shSTAT3/shPD-L1 composite part can significantly inhibit the proliferation of colon cancer cells!


3 The effect of shSTAT3/shPD-L1 on the apoptosis of colorectal cancer CT26 cells.

3.1 Evaluate the effect of shSTAT3/shPD-L1 on apoptosis in CT26 colon cancer cells by flow cytometry.

The effect of the recombinant plasmid on CT26 cell apoptosis was quantified using flow cytometry. We collected the cells after 48h transfection and stained them with Annexin V-FITC/PI, and measured the fluorescence intensity to determine the proportion of apoptotic cells (Fig 5). The results showed that the proportion of apoptotic CT26 cells significantly increased after 48h transfection with shSTAT3/shPD-L1 recombinant plasmid, compared with the control and single-silenced groups. The results indicated that the recombinant plasmid shSTAT3/shPD-L1 promoted the apoptosis of CT26 cells.

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Figure 5. The percentage of cell apoptosis was determined by flow cytometry (A) Quantification of apoptosis results detected by flow cytometry (B) Quantification of apoptosis results(Data are mean±SEM)

Our designed shSTAT3/shPD-L1 composite part can significantly promotes apoptosis in colorectal cancer cells!


3.2 Assess the effect of shSTAT3/shPD-L1 on apoptosis in CT26 colon cancer cells by western blot.

Next, we detected the expression of apoptosis-related proteins by western blotting to verify the effect of the shSTAT3/shPD-L1 recombinant plasmid on the apoptosis of colon cancer CT26 cells. Compared to the control group and the single-silenced group, Cleaved Caspase-3 protein was significantly increased in the shSTAT3/shPD-L1 recombinant plasmid transfection group, the expression level of Bcl-2 was decreased, and the ratio of Bcl-2 to Bax protein was decreased (Fig 6). These results further illustrate that the shSTAT3/shPD-L1 recombinant plasmid promoted apoptosis in colon cancer cells by regulating the expression of apoptosis-related proteins.

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Figure 6. Western blot analysis for apoptosis-related protein expression(A) Results of apoptosis-related proteins (B) Quantification of Bcl-2 / Bax protein results (C) Quantification plots of the Cleaved-caspase3 protein results(Data are mean±SEM)

Our designed shSTAT3/shPD-L1 composite part can promote apoptosis in CT26 cells by regulating apoptosis-related proteins!


4 shSTAT3/shPD-L1 induce cell cycle arrest in colorectal cancer CT26 cells.

4.1 The effect of shSTAT3/shPD-L1 on the cell cycle of colon cancer CT26 cells was determined by flow cytometry

The effect of recombinant plasmids on the cell cycle of colon cancer CT26 was examined using flow cytometry. Cells transfected for 48 h were harvested for PI staining. Figure 7 shows that the number of G1 cells in the recombinant plasmid group was significantly increased (P <0.001) and S phase cells decreased (P <0.05), with a statistically significant difference. The above results demonstrated that the shSTAT3/shPD-L1 recombinant plasmid was able to make CT26 cells undergo G1 phase arrest, thereby inhibiting cancer cell proliferation.

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Figure 7. Cell cycle was determined by flow cytometry experiments(A) Cell cycle results diagram of flow cytometry experiments (B) Quantification diagram of cell cycle results(Data are mean±SEM)


4.2 Test the effect of shSTAT3/shPD-L1 on cell cycle-related proteins of CT26 cells by western blot. To explore the effect of shSTAT3/shPD-L1 recombinant plasmid on cell cycle arrest in CT26 cells, CT26 cell cycle-related protein expression changes after plasmid transfection were determined by Western blot assay. Figure 8 shows that the expression of G1 phase arrest-related protein Cyclin D1 was significantly downregulated compared with the single silenced group (P <0.01). Western blot The experiment show that the recombinant plasmid may induce G1 phase cycle arrest, which may inhibit cell proliferation.

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Figure 8. Cell Cycle-related proteins were detected by flow cytometry (A) Results of cell cycle related proteins (B) Quantification of cell cycle related protein results(Data are mean±SEM)


5 The effect of shSTAT3/shPD-L1 on the migration ability of colorectal cancer CT26 cells.

5.1 Detect the effect of shSTAT3/shPD-L1 on the migration ability of colon cancer CT26 cells by Transwell.

CT26 cell migration capacity was measured by quantifying the Transwell compartment bottom membrane across cell numbers. In Figure 9, the crystal violet staining of cells crossing the bottom membrane of the Transwell chamber showed that the shSTAT3/shPD-L1 recombinant plasmid transfection group had the smallest staining degree and the least number of migrated cells; the absorbance of the shSTAT3/shPD-L1 recombinant plasmid transfection group, indicating that the least number of migrated cells and the difference was statistically significant (P <0.001).

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Fig.9 Transwell chamber invasion assay for cell migration ability (A)Plot of invasion results (B) Quantification of invasion results(Data are mean±SEM)


5.2 Examine the effect of shSTAT3/shPD-L1 on the migratory ability of CT26 cells by cell scratch assay

To test the effect of recombinant plasmids on cell migration ability, the scratch healing distance was observed after cell transfection at 24 h by cell scratch assay. Figure 10 shows that the shSTAT3 / shPD-L1 recombinant plasmid group had the shortest scratch healing distance (P <0.001), indicating that the shSTAT3 / shPD-L1 recombinant plasmid carried by Salmonella could significantly inhibit the migration ability of colon cancer CT26 cells.

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Fig.10 Cell scratch assay tested for cell migration ability (A)Results of scratch results (B) Quantification of scratch results (Data are mean±SEM)

In summary, our designed shSTAT3/shPD-L1 composite part can significantly inhibit CT26 cell proliferation, promote CT26 cell apoptosis, and suppress the migration of colorectal cancer CT26 cells.

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